MICROBE Data Portal

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SAMEA117548982: metag_MICROBE_HEG_2023

Sample data for SAMEA117548982, a MICROBE sample from the Soil use case.


Soil cryopreservation workflow

Soil cryopreservation workflow

Find MICROBE soil samples by the combination of preservation and analysis methods used.

Current sample metadata
Sample details
Use case
Soil Soil
Sample type
None
Experiment type
Cryopreservation
API endpoint
/api/samples/SAMEA117548982 Copy API Endpoint
Sample metadata

Metadata for sample SAMEA117548982, stored in BioSamples and ENA.

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BioSamples attributes

Key Value
sra_accession ERS22616999
analysis_date 2024-02-14
broad_scale_environmental_context temperate biome
center HMGU
checklist ERC000022
collection_date 2023-05-01
cooling_rate uncontrolled (degree Celsius per minute)
cryoprotectant none
cultivation not provided
depth not provided (m)
elevation not provided (m)
environmental_medium bulk soil
freezing_method none
geographic_location_country_andor_sea Germany
geographic_location_latitude 51.27 (DD)
geographic_location_longitude 10.5 (DD)
geographic_location_region_and_locality Hainich
local_environmental_context Grassland soil
organism soil metagenome
preservation_duration 289 (day)
preservation_end_date 2024-02-14
preservation_method freeze-free preservation
preservation_start_date 2023-05-01
project_name MICROBE
sample_subtype soil
sample_type environmental
soil_type Cambisol
storage_preservation_temperature 4 (degree Celsius)
Nucleotide sequencing data

Sample SAMEA117548982 has nucleotide sequencing data in the European Nucleotide Archive (ENA): Unknownbp sequenced by unknown reads. View sample SAMEA117548982 in ENA

Related records in ENA

Data domain Accession Title/alias
Sample SAMEA117548982
Reads (Run)
Reads (Experiment)
Project/Study

Analysis summaries

Documents written by MICROBE partners and collaborators relevant to Sample SAMEA117548982

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No summaries mention this sample directly