MICROBE Data Portal

Access samples and data collected and generated by the MICROBE project.

SAMEA120225059: M5_T0_M_0

Sample data for SAMEA120225059, a MICROBE sample from the Seed use case.


Sample details
Use case
Seed Seed
Sample type
None
Experiment type
Cryopreservation
API endpoint
/api/samples/SAMEA120225059 Copy API Endpoint
Sample metadata

Metadata for sample SAMEA120225059, stored in BioSamples and ENA.

 Download all as TSV

BioSamples attributes

Key Value
sra_accession ERS26886021
assay DNA
broad_scale_environmental_context cultivated environment
center INRAE
checklist ERC000020
collection_date 2020-11-01
cryoprotectant none
cultivation_time none
environmental_medium seed lot
freezing_method none
geographic_location_country_andor_sea France
geographic_location_latitude 47.46963485 (DD)
geographic_location_longitude -0.39594451 (DD)
geographic_location_region_and_locality Maine-et-Loire
host_scientific_name Phaseolus vulgaris cv. Flavert
local_environmental_context cropland biome
organism seed metagenome
preservation_duration none
preservation_finish_date 2024-06-27
preservation_start_date none
project_name MICROBE
sample_subtype seed
sample_type environmental
soil_component macerate
storage_preservation_temperature none
targets 16S/gyrB/ITS
Nucleotide sequencing data

Sample SAMEA120225059 has nucleotide sequencing data in the European Nucleotide Archive (ENA): Unknownbp sequenced by unknown reads. View sample SAMEA120225059 in ENA

Related records in ENA

Data domain Accession Title/alias
Sample SAMEA120225059
Reads (Run)
Reads (Experiment)
Project/Study

Analysis summaries

Documents written by MICROBE partners and collaborators relevant to Sample SAMEA120225059

Empty set icon

No summaries mention this sample directly