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SAMEA120443093: S1_YF_T_2

Sample data for SAMEA120443093, a MICROBE sample from the Seed use case.


Sample details
Use case
Seed Seed
Sample type
None
Experiment type
SynComs
API endpoint
/api/samples/SAMEA120443093 Copy API Endpoint
Constituent taxa

Taxa included in Defined Microbial Community sample SAMEA120443093.

Taxon BioSamples accession
Filobasidium stepposum SAMEA120538186
Vishniacozyma heimaeyensis SAMEA120538187
Holtermanniella festucosa SAMEA120538188
Cladosporium delicatulum SAMEA120538189
Mycosphaerella tassiana SAMEA120538190
Plectosphaerella sp. SAMEA120538191
Sample metadata

Metadata for sample SAMEA120443093, stored in BioSamples and ENA.

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BioSamples attributes

Key Value
sra_accession ERS27143779
center INRAE
checklist ERC000011
collection_date 2021-07-01
cooling_rate uncontrolled
cryoprotectant Trehalose 14%
environmental_medium Seed lot
freezing_method Ultra Low Temperature Freezer
freezing_temperature -80 (degree Celsius)
geographic_location_country_andor_sea France
geographic_location_latitude 48.10889934 (DD)
geographic_location_longitude -1.79270048 (DD)
geographic_location_region_and_locality Ile et Vilaine
host_scientific_name Brassica napus
organism synthetic microbial community
preservation_duration 3 (month)
preservation_method freezing
project_name MICROBE
sample_subtype seed
sample_type synthetic community
storage_preservation_temperature -195 (degree Celsius)
Nucleotide sequencing data

Sample SAMEA120443093 has nucleotide sequencing data in the European Nucleotide Archive (ENA): Unknownbp sequenced by unknown reads. View sample SAMEA120443093 in ENA

Related records in ENA

Data domain Accession Title/alias
Sample SAMEA120443093
Reads (Run)
Reads (Experiment)
Project/Study

Analysis summaries

Documents written by MICROBE partners and collaborators relevant to Sample SAMEA120443093

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No summaries mention this sample directly