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SAMEA121055799: DSMZ-H-255

Sample data for SAMEA121055799, a MICROBE sample from the Soil use case.


Soil cryopreservation workflow

Soil cryopreservation workflow

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Current sample metadata
Sample details
Use case
Soil Soil
Sample type
None
Experiment type
Cryopreservation
API endpoint
/api/samples/SAMEA121055799 Copy API Endpoint
Sample metadata

Metadata for sample SAMEA121055799, stored in BioSamples and ENA.

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BioSamples attributes

Key Value
cultivation_medium SSE/HD 1:10
sra_accession ERS28601142
supporting_experiment MPN, Biolog, 4MU
broad_scale_environmental_context temperate broadleaf evergreen forest
center DSMZ
checklist ERC000022
collection_date 2025-05-05
cryoprotectant 10 % Glycine Betaine + 10% Trehalose
depth not applicable (m)
elevation not applicable (m)
environmental_medium bulk soil
freezing_method plunge
freezing_temperature -80 (degree Celsius)
geographic_location_country_andor_sea Germany
geographic_location_latitude not applicable (DD)
geographic_location_longitude not applicable (DD)
geographic_location_region_and_locality Angermünde
intermediate_storage_during_transport_to_lab_temperature 4 (degree Celsius)
intermediate_storage_in_the_lab_temperature 4 (degree Celsius)
local_environmental_context Grassland soil
organism soil metagenome
preservation_duration 15 (days)
preservation_finish_date_and_time 2025-05-27
preservation_method freezing
preservation_start_date_and_time 2025-05-12
project_name MICROBE
sample_subtype soil
sample_type environmental
soil_type Histosol
storage_preservation_temperature -80 (degree Celsius)
targets 16S, ITS, Archaea
time_to_preservation_collection_time_point_start_of_preservation 7 (day(s))
Nucleotide sequencing data

Sample SAMEA121055799 has nucleotide sequencing data in the European Nucleotide Archive (ENA): Unknownbp sequenced by unknown reads. View sample SAMEA121055799 in ENA

Related records in ENA

Data domain Accession Title/alias
Sample SAMEA121055799
Reads (Run)
Reads (Experiment)
Project/Study

Analysis summaries

Documents written by MICROBE partners and collaborators relevant to Sample SAMEA121055799

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No summaries mention this sample directly