MICROBE Data Portal

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SAMEA122023034: CABI_80

Sample data for SAMEA122023034, a MICROBE sample from the Soil use case.


Soil cryopreservation workflow

Soil cryopreservation workflow

Find MICROBE soil samples by the combination of preservation and analysis methods used.

Current sample metadata
Sample details
Use case
Soil Soil
Sample type
None
Experiment type
Cryopreservation
API endpoint
/api/samples/SAMEA122023034 Copy API Endpoint
Sample metadata

Metadata for sample SAMEA122023034, stored in BioSamples and ENA.

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BioSamples attributes

Key Value
cultivation_medium SSE/HD 1:10
sra_accession ERS29530047
supporting_experiment MPN, Biolog, 4MU
broad_scale_environmental_context temperate broadleaf evergreen forest
center CABI
checklist ERC000022
collection_date 2025-05-12
cryoprotectant none
depth not applicable (m)
elevation not applicable (m)
environmental_medium bulk soil
geographic_location_country_andor_sea Germany
geographic_location_latitude not applicable (DD)
geographic_location_longitude not applicable (DD)
geographic_location_region_and_locality Mühlhausen
intermediate_storage_during_transport_to_lab_temperature 5 (degree Celsius)
intermediate_storage_in_the_lab_temperature 4 (degree Celsius)
local_environmental_context Grassland soil
organism soil metagenome
preservation_duration 15 (days)
project_name MICROBE
sample_subtype soil
sample_type environmental
soil_type Cambisol
targets 16S, ITS, Archaea
time_to_preservation_collection_time_point_start_of_preservation 7 (days)
Nucleotide sequencing data

Sample SAMEA122023034 has nucleotide sequencing data in the European Nucleotide Archive (ENA): Unknownbp sequenced by unknown reads. View sample SAMEA122023034 in ENA

Related records in ENA

Data domain Accession Title/alias
Sample SAMEA122023034
Reads (Run)
Reads (Experiment)
Project/Study

Analysis summaries

Documents written by MICROBE partners and collaborators relevant to Sample SAMEA122023034

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No summaries mention this sample directly